There are 391 articles for you to read.

Distinguishing Cis and Trans Regulation: A Focus on miRNAs

Author: gene_x

Abstract: Cis-regulation vs Trans-regulation (in gene expression): Feature | Cis-regulation | Trans-regulation | :------------ | :------------ | :------------ | :------------ | | Location | Regulator is on th

Comprehensive Genomic and Phenotypic Characterization of a Clinically Susceptible Acinetobacter baumannii Isolate Harboring Extensive Resistance Determinants

Author: gene_x

Abstract: 摘要 鲍曼不动杆菌(Acinetobacter baumannii)是一种机会性病原体,常导致院内感染,并与高死亡率及发病率相关。 本研究对临床分离株HKAB-1(源自一名左心衰竭患者)进行了全面的表型分析,包括抗生素敏感性、生长动力学、生物膜形成及运动能力评估。 基于Illumina NovaSeq平台的全基因组测序及深入生物信息学分析发现,HKAB-1的表型抗生素

Processing for Data_Tam_DNAseq_2025_ATCC19606

Author: gene_x

Abstract: 1. Download the raw data. see README_Downloads 2. Call variant calling using snippy ln -s ~/Tools/bacto/db/ .; ln -s ~/Tools/bacto/envs/ .; ln -s ~/Tools/bacto/local/ .;

Processing for Data_Marius_16S_2025

Author: gene_x

Abstract: 1. Target 16sRNAseq Analyse - Legend Groups * (1) A1-A11 male aged 3d post-stroke * (2) B1-B16 female aged 3d post-stroke * (3) C1-C10 female aged BL FMT donor

Data_Tam_DNAseq_2025 NACHREICHEN_2

Author: gene_x

Abstract: > HF samples (Enterobacter hormaechei strain HKEH-1 vs. CP095177, CP095178, CP095179) > Definition: If genome comparison verify the bacterium is Enterobacter hormaechei, we can name it as “Enterobact

Data_Tam_DNAseq_2025 NACHREICHEN_1

Author: gene_x

Abstract: > For Clinical and HF a) Please proceed with SNP and indel calling for both clinical samples. #-- DNAseq_2025_AYE: clinical vs CP149838 (Acinetobacter baumannii strain 2024CK-00130) --

Comprehensive smallRNA-7 profiling using exceRpt pipeline with full reference databases (v2)

Author: gene_x

Abstract: 1. Input data # name condition # ---------------------------------------------- # 0403_WaGa_wt parental_cells_1.fastq.gz # #050

Mapping of reads to selected viruses in DAMIAN results (version 2)

Author: gene_x

Abstract: [![RV4_DNA_on_HSV-2_strain_G_OM370995](/static/images/RV4_DNA_on_HSV-2_strain_G_OM370995.png "RV4_DNA_on_HSV-2_strain_G_OM370995")](/static/images/RV4_DNA_on_HSV-2_strain_G_OM370995.png "RV4_DNA_on_HS

H65.3 G and J35.2 G

Author: gene_x

Abstract: > Am 23. Juli um 9 Uhr H65.3 G – Chronischer Seromukotympanon * Das bedeutet: Chronischer Paukenerguss (Flüssigkeit hinter dem Trommelfell, oft ohne akute Entzündung). * Kommt bei Kindern oft

Run the viral-ngs Snakemake pipelines inside a Docker environment

Author: gene_x

Abstract: 1. Pull the viral-ngs Docker Image docker pull quay.io/broadinstitute/viral-ngs docker run -t quay.io/broadinstitute/viral-ngs # Without /bin/bash → May run and exit immedia


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